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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6567532_6577445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6567532 - 6577445

Intron Length:

9914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

ACAGCCTGACTG

Flanking Amino Acid:

VRLLVDTDAQGAERATAVML

Intron Amino Acid Position:

1072

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.5

38.7

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

82.9

0.74

0.8

76.8

31.7

Minor 5ss

26.2

-2.7

2.9

22.7

37.4

Minor BPS

43.9

-0.6

1.8

43.01

42.7

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496