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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6569698_6571316_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6569698 - 6571316

Intron Length:

1619

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCATTTTTA

5'SS Class:

major

3'SS Sequence:

GGAACTTGATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTCGAA

U12 Branch Point Sequence:

AGTTCTCGAACA

Flanking Amino Acid:

HSARSELKKIASGARCRTPC

Intron Amino Acid Position:

127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

69.5

37.4

Major BPS

0.05

1.3

52.4

Major PPT

54.2

0.09

1.1

51.4

46.6

Minor 5ss

39.6

-1.2

3.9

58.1

46.4

Minor BPS

54.3

0.13

1.8

68.61

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002144

6569207 - 6574234

5028