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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6578139_6579242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6578139 - 6579242

Intron Length:

1104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGTCC

5'SS Class:

major

3'SS Sequence:

TTTCCCTACGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

TTTTCCCTACGC

Flanking Amino Acid:

SELLLRRLAQLLNQVLNRVT

Intron Amino Acid Position:

1019

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

58.6

41.6

Major BPS

60.7

0.27

65.3

28.1

Major PPT

77.8

0.63

0.8

73.6

30.2

Minor 5ss

42.5

-0.8

3.3

60.1

44.6

Minor BPS

53.1

0.08

2.2

75.12

41.7

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496