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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6589090_6590095_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6589090 - 6590095

Intron Length:

1006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

TGTTGTGTGACC

Flanking Amino Acid:

SPVNSMEELPGYEETLMRLA

Intron Amino Acid Position:

797

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

0.63

0.8

32.5

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

47.1

-0.2

2.4

65.85

40.5

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496