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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6593049_6593859_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6593049 - 6593859

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TACTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TATTTCTGTACT

Flanking Amino Acid:

EEKISRCPKRRRDIHEELLK

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

86.3

0.82

0.7

84.3

30.1

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

61.7

0.45

1.8

81.77

39.5

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007811

6566506 - 6610001

43496

ENSAPLT00000041169

6566506 - 6610001

43496