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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6593944_6594126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6593944 - 6594126

Intron Length:

183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

ATACCCTCATCT

Flanking Amino Acid:

NLSVHQQLGKMVGVSDDVNE

Intron Amino Acid Position:

674

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

Major BPS

0.1

59.7

32.6

Major PPT

83.3

0.75

0.9

80.2

37.3

Minor 5ss

-1.9

3.2

42.9

44.7

Minor BPS

54.3

0.21

1.8

73.75

42.3

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496