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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6594273_6594806_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6594273 - 6594806

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

GGGCGGATTGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TTGCTGAGAACT

Flanking Amino Acid:

LSVEQRTEEDIEGTHGNEGL

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

74.6

35.3

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

0.16

1.1

46.9

44.8

Minor 5ss

35.1

-1.7

2.8

49.5

40.3

Minor BPS

43.4

-0.4

2.3

66.95

43.4

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496