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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6595000_6595404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6595000 - 6595404

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCAGTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CCTCCCTTAATT

Flanking Amino Acid:

DEESATSAAQRPSAALAIGG

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

38.4

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

0.54

0.9

65.5

40.1

Minor 5ss

34.1

-1.8

3.2

46.7

48.6

Minor BPS

75.1

0.87

1.3

81.08

41.1

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496