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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6595512_6597038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6595512 - 6597038

Intron Length:

1527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CGTGCATTCACA

Flanking Amino Acid:

LLSHLKKTLKDDLAAKANVL

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

0.72

38.9

Major PPT

73.8

0.54

68.8

41.9

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

47.6

-0.1

2.1

60.92

44.9

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007811

6566506 - 6610001

43496

ENSAPLT00000041169

6566506 - 6610001

43496