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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6598717_6599601_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6598717 - 6599601

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

AGTTCACCATCT

Flanking Amino Acid:

LLLNNKDRGGGEASRYIFLN

Intron Amino Acid Position:

427

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

75.3

40.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

75.3

0.57

0.9

69.3

36.9

Minor 5ss

41.6

-0.9

2.9

45.2

Minor BPS

42.9

-0.4

2.2

66.16

43.5

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496