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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6600122_6600337_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6600122 - 6600337

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTCTTCTTAATC

Flanking Amino Acid:

TWWPNRFTKEGKESKDVKEE

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

60.2

0.23

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

73.2

0.71

1.2

73.1

38.8

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496