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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6601013_6601208_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6601013 - 6601208

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTAGAT

U12 Branch Point Sequence:

TGTAGATGGAGT

Flanking Amino Acid:

SPIIPDLGLQIHYLRLTIAV

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

0.35

1.2

60.7

45.9

Major PPT

81.5

0.71

0.8

77.3

31.5

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

38.8

-0.8

2.3

58.77

43.9

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496