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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6602071_6602201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6602071 - 6602201

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

GGCTGTTGACCT

Flanking Amino Acid:

HIFNYFSPLMCKVYLVEDVL

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

79.5

0.66

0.9

73.2

37.2

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

43.2

-0.4

57.79

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007811

6566506 - 6610001

43496

ENSAPLT00000041169

6566506 - 6610001

43496