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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6607843_6608520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6607843 - 6608520

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTAA

5'SS Class:

major

3'SS Sequence:

GTACTTGGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

TAGTCTGAAACT

Flanking Amino Acid:

CTLNCRFNQEEGVGDTPDSY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

64.9

37.3

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

67.2

0.39

1.1

61.3

44.3

Minor 5ss

-1.7

3.4

46.8

48.5

Minor BPS

0.01

2.3

72.38

44.9

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496