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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6608607_6608936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6608607 - 6608936

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TGTGTGTTATCA

Flanking Amino Acid:

SIRATTCVYKGKWIYEVLIS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

91.1

0.93

0.7

89.2

26.8

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

46.5

-0.2

2.3

63.08

43.5

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496