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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6608992_6609920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6608992 - 6609920

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTGGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTTTGCCTAACT

Flanking Amino Acid:

LLLVDDDLLGVIGHSNFGSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

73.1

0.58

79.6

29.1

Major PPT

76.6

0.6

69.2

46.1

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

68.5

0.66

2.1

92.91

35.6

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496