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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6651242_6651576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6651242 - 6651576

Intron Length:

335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCAAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

ATTTCCTCAAAA

Flanking Amino Acid:

ENTTSVSDHKVLDLIVLLLI

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

77.4

37.4

Major BPS

76.8

0.67

40.9

Major PPT

62.6

0.28

1.1

65.2

34.3

Minor 5ss

-1.4

3.3

57.1

Minor BPS

0.63

1.6

80.01

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037209

6642794 - 6654331

11538