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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6667211_6667298_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6667211 - 6667298

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGCA

5'SS Class:

major

3'SS Sequence:

CTCTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCTCCCTCACCA

Flanking Amino Acid:

KRLTQEQVSDSQVLIRSRVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

66.7

39.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

85.4

0.8

0.7

80.1

25.2

Minor 5ss

24.9

-2.9

3.2

30.6

42.7

Minor BPS

49.3

-0

1.9

60.78

45.1

Associated Gene:

Gene:

EMC3

Ensembl Gene ID:

ENSAPLG00000001148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001273

6667056 - 6670617

3562