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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6668511_6669124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6668511 - 6669124

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

CTTGGTAAAACT

Flanking Amino Acid:

INMTFSGFVTTKVPFPLTLR

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

0.83

0.7

81.7

30.4

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

42.2

-0.5

2.3

63.67

Associated Gene:

Gene:

EMC3

Ensembl Gene ID:

ENSAPLG00000001148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001273

6667056 - 6670617

3562