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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6669455_6670044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6669455 - 6670044

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TAAGAATGAACC

Flanking Amino Acid:

IYTLILGQDNAADQSRVMQE

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

91.3

0.93

0.6

88.5

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

45.2

-0.3

1.9

56.24

Associated Gene:

Gene:

EMC3

Ensembl Gene ID:

ENSAPLG00000001148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001273

6667056 - 6670617

3562