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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6676659_6676785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6676659 - 6676785

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAGAT

U12 Branch Point Sequence:

TCTTTCAGATTC

Flanking Amino Acid:

VSAASEDQIVTKAAYVLFYQ

Intron Amino Acid Position:

924

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

74.1

0.6

38.9

Major PPT

70.9

0.47

68.5

37.3

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

45.8

-0.3

1.9

59.44

40.1

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496