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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6678388_6679159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6678388 - 6679159

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATTC

5'SS Class:

strong_major

3'SS Sequence:

GATTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

GTAACCTGTACT

Flanking Amino Acid:

KLDTVVEFPIRGLNMSEFVC

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.9

34.8

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

82.7

0.74

0.9

73.8

41.4

Minor 5ss

41.1

-1

3.4

58.5

46.3

Minor BPS

52.4

0.16

1.9

71.9

43.9

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496