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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6679310_6680202_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6679310 - 6680202

Intron Length:

893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TAGCCTTTCATT

Flanking Amino Acid:

TMETLGEHDPWYCPNCKKHQ

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

38.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

79.1

0.65

0.8

30.9

Minor 5ss

32.4

-2

37.8

40.6

Minor BPS

53.9

0.2

1.7

70.12

41.4

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496