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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6682263_6683232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6682263 - 6683232

Intron Length:

970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCCT

5'SS Class:

major

3'SS Sequence:

TAAATTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTGTTTTAAATT

Flanking Amino Acid:

TCNGSSGVAEGDIEEMDHQD

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.4

41.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.7

0.42

1.1

62.1

47.9

Minor 5ss

32.7

-2

3.4

48.4

47.3

Minor BPS

62.8

0.48

1.6

78.42

39.1

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496