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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6683322_6683866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6683322 - 6683866

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

GACCTCTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTTGTTATGACT

Flanking Amino Acid:

HLYVVVLEQISRYVKLPLAE

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

72.3

39.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

64.4

0.33

61.8

39.6

Minor 5ss

38.2

-1.3

3.1

50.1

46.5

Minor BPS

56.1

0.27

1.7

79.08

37.4

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496