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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6695839_6696547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6695839 - 6696547

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGAAA

5'SS Class:

major

3'SS Sequence:

CTTGCTGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTATTATAATC

Flanking Amino Acid:

SKLSGVPAENMVVTDVYNHR

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

76.9

33.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

73.7

0.53

0.9

65.4

41.1

Minor 5ss

-1.8

3.2

44.1

43.8

Minor BPS

58.2

0.24

1.6

71.33

33.8

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496