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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6699258_6701472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6699258 - 6701472

Intron Length:

2215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTATGGTGC

5'SS Class:

major

3'SS Sequence:

TTAATTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATT

Flanking Amino Acid:

LKDANGRPDSVVAKEAWENH

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

57.8

42.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.5

0.8

80.1

37.1

Minor 5ss

43.7

-0.7

3.1

58.7

46.2

Minor BPS

78.6

0.98

86.64

33.8

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496