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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6712213_6712471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6712213 - 6712471

Intron Length:

259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

AACTCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTACCTGAACT

Flanking Amino Acid:

VQDAGLYHGQVVLIEVKNDD

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.6

0.62

0.9

73.8

35.8

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

0.86

1.4

88.81

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496