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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6713841_6717328_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6713841 - 6717328

Intron Length:

3488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGGAGTGG

5'SS Class:

weak_major

3'SS Sequence:

CTGGAGGTAGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCGCAT

U12 Branch Point Sequence:

TTTGTCGCATCT

Flanking Amino Acid:

QQPIVRKVSMEYGLFVKHCK

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.5

0.11

1.1

41.6

41.9

Major BPS

52.2

0.06

1.5

65.3

43.7

Major PPT

50.1

1.1

43.5

Minor 5ss

28.2

-2.5

3.4

28.2

Minor BPS

44.2

-0.3

2.4

71.23

45.9

Associated Gene:

Gene:

USP4

Ensembl Gene ID:

ENSAPLG00000014796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015545

6676557 - 6718052

41496