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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6723448_6723930_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6723448 - 6723930

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCCCTGCT

5'SS Class:

weak_major

3'SS Sequence:

GTCGGTCGGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGTCT

U12 Branch Point Sequence:

GTGGCTGTGTCT

Flanking Amino Acid:

SCAARGAMAAEVLAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.4

0.01

1.4

53.5

43.8

Major BPS

23.4

-1.6

4.1

45.3

47.5

Major PPT

43.7

-0.3

1.7

46.1

45.9

Minor 5ss

35.4

-1.7

3.4

48.2

42.6

Minor BPS

33.7

-1.2

3.6

58.64

45.3

Associated Gene:

Gene:

GPX1

Ensembl Gene ID:

ENSAPLG00000001202

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001185

6722750 - 6723946

1197