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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6732054_6734793_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6732054 - 6734793

Intron Length:

2740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

AACTGGCTAACT

Flanking Amino Acid:

VADIEVDGKQVELALWDTAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.9

76.4

39.6

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

82.1

0.72

0.8

76.9

31.8

Minor 5ss

35.2

-1.7

3.5

48.8

47.4

Minor BPS

42.9

-0.4

2.6

64.05

45.9

Associated Gene:

Gene:

RHOA

Ensembl Gene ID:

ENSAPLG00000014687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015315

6727656 - 6734949

7294