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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6773286_6774565_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6773286 - 6774565

Intron Length:

1280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CACTTCTTAATT

Flanking Amino Acid:

SQHINWVRCARFSPDGRLIV

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

76.1

0.59

0.8

69.2

36.3

Minor 5ss

-1.9

3.2

42.9

44.7

Minor BPS

71.3

0.75

1.2

76.1

41.2

Associated Gene:

Gene:

POC1A

Ensembl Gene ID:

ENSAPLG00000007756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044378

6767594 - 6821103

53510

ENSAPLT00000008061

6766540 - 6821103

54564