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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6774674_6775800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6774674 - 6775800

Intron Length:

1127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCAATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTGGATTTAACT

Flanking Amino Acid:

ECIHSFCEHGGFVNHVDFHP

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

81.4

32.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

72.8

0.51

64.9

40.1

Minor 5ss

35.6

-1.6

2.7

37.5

40.1

Minor BPS

65.4

0.56

1.6

80.44

41.7

Associated Gene:

Gene:

POC1A

Ensembl Gene ID:

ENSAPLG00000007756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044378

6767594 - 6821103

53510

ENSAPLT00000008061

6766540 - 6821103

54564