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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6781806_6791044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6781806 - 6791044

Intron Length:

9239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

AACTTCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTTTTAAACT

Flanking Amino Acid:

RLLYTLHGHQGPATCVAFSR

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.1

0.57

0.9

68.7

36.3

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

66.7

0.6

1.6

82.56

39.6

Associated Gene:

Gene:

POC1A

Ensembl Gene ID:

ENSAPLG00000007756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008061

6766540 - 6821103

54564

ENSAPLT00000044378

6767594 - 6821103

53510