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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6791114_6793700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6791114 - 6793700

Intron Length:

2587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATAGACAAAACT

Flanking Amino Acid:

FFASGGSDEQVMVWKTNFDA

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

36.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.1

0.88

0.6

84.6

23.2

Minor 5ss

40.6

-1

2.8

52.4

44.8

Minor BPS

44.7

-0.3

2.1

65.37

44.5

Associated Gene:

Gene:

POC1A

Ensembl Gene ID:

ENSAPLG00000007756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044378

6767594 - 6821103

53510

ENSAPLT00000008061

6766540 - 6821103

54564