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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7171382_7172280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7171382 - 7172280

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTATTCCACCT

Flanking Amino Acid:

QEMIDEVDEDGSGTVDFDEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

74.9

0.56

0.9

67.4

33.4

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

44.3

-0.3

69.05

Associated Gene:

Gene:

TNNC1

Ensembl Gene ID:

ENSAPLG00000008432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008797

7170991 - 7175755

4765