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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7194800_7195236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7194800 - 7195236

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCATTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTATTT

Flanking Amino Acid:

LAQFGDRASEVCLDNIVTTE

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.8

34.3

Major BPS

100

1.24

0.5

100

Major PPT

83.7

0.76

0.8

81.3

35.1

Minor 5ss

31.6

-2.1

3.4

42.4

45.1

Minor BPS

68.3

0.65

1.8

89.23

35.4

Associated Gene:

Gene:

NISCH

Ensembl Gene ID:

ENSAPLG00000007897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008274

7187649 - 7207177

19529