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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7201848_7202260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7201848 - 7202260

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAATT

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTCTCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTCTGGATCT

Flanking Amino Acid:

LDSNRHSQSASFCKPHLTLS

Intron Amino Acid Position:

907

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.1

84.6

33.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

70.4

0.46

0.9

62.2

39.2

Minor 5ss

-0.5

66.7

44.2

Minor BPS

49.4

0.04

2.3

80.48

41.6

Associated Gene:

Gene:

NISCH

Ensembl Gene ID:

ENSAPLG00000007897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008274

7187649 - 7207177

19529