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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7203781_7204327_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7203781 - 7204327

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ATATCTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTTCTTTTGACT

Flanking Amino Acid:

SFIRVDEHQLEFWNEEHSDC

Intron Amino Acid Position:

1017

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

71.7

0.49

66.9

38.5

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

74.3

0.85

1.1

87.98

30.3

Associated Gene:

Gene:

NISCH

Ensembl Gene ID:

ENSAPLG00000007897

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008274

7187649 - 7207177

19529