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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7222900_7223655_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7222900 - 7223655

Intron Length:
756

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTCGGTGTG

5'SS Class:
major

3'SS Sequence:
GGGTCCCTTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATAACAT

U12 Branch Point Sequence:
AGAAAAATAACA

Flanking Amino Acid:
IQQNGTCICKEQYSGFACQN

Intron Amino Acid Position:
112

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.3
67.1
44.6

Major BPS
62.2
0.3
1.1
69.4
35.8

Major PPT
65.4
0.35
0.9
55.1
41.3

Minor 5ss
30.3
-2.3
3.4
40.1
46

Minor BPS
42.8
-0.5
1.9
52.53
37.7

Associated Gene:

Gene:
STAB1

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

7220142 - 7270852
50711