Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_7225147_7225968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7225147 - 7225968

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATTT

Flanking Amino Acid:

GYRKSGSTCIAQDPCASSPC

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.4

0.98

0.7

89.1

26.3

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

59.2

0.37

1.5

72.97

39.1

Associated Gene:

Gene:

STAB1

Ensembl Gene ID:

ENSAPLG00000006699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007093

7220142 - 7270852

50711