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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7254500_7257134_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7254500 - 7257134

Intron Length:

2635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAAGGGG

5'SS Class:

major

3'SS Sequence:

GAAAAAAAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

GTTTCATTGAGA

Flanking Amino Acid:

KGPTCQESTQMVRVNKIMRF

Intron Amino Acid Position:

1236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.3

0.27

1.1

50.1

40.7

Major BPS

0.7

0.9

79.6

29.1

Major PPT

41.6

-0.4

1.1

25.5

33.6

Minor 5ss

-2.9

3.5

32.2

Minor BPS

57.9

0.24

1.9

72.63

Associated Gene:

Gene:

STAB1

Ensembl Gene ID:

ENSAPLG00000006699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007093

7220142 - 7270852

50711