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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7270286_7270437_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7270286 - 7270437

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCAGGCGGT

5'SS Class:

weak_major

3'SS Sequence:

GGATCAATGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

GGATCAATGACA

Flanking Amino Acid:

VSDLPVGNGTEMIVEWDIVA

Intron Amino Acid Position:

2178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.9

0.19

1.3

60.3

41.5

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

54.7

0.11

1.1

47.5

43.8

Minor 5ss

27.6

-2.6

4.5

41.8

46.2

Minor BPS

47.9

-0.1

1.9

59.64

Associated Gene:

Gene:

STAB1

Ensembl Gene ID:

ENSAPLG00000006699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007093

7220142 - 7270852

50711