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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7272325_7272511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7272325 - 7272511

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAG

U12 Branch Point Sequence:

CTGCCTACAGCT

Flanking Amino Acid:

LEWMKERQEIRSLTKNLFNP

Intron Amino Acid Position:

477

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

48.1

-0.1

1.7

55.4

48.1

Major PPT

0.88

0.6

88.2

21.5

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

42.2

-0.5

1.9

58.53

44.4

Associated Gene:

Gene:

NT5DC2

Ensembl Gene ID:

ENSAPLG00000006247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006522

7272063 - 7297371

25309