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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7306708_7308980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7306708 - 7308980

Intron Length:

2273

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTTTTATATTT

Flanking Amino Acid:

MPGIPGIPPPGVIGQNVSPM

Intron Amino Acid Position:

1483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

75.8

Major BPS

79.2

0.73

75.3

39.4

Major PPT

69.1

0.43

42.2

Minor 5ss

37.6

-1.4

3.1

50.5

45.5

Minor BPS

49.9

0.07

1.8

72.8

38.7

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851