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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7309137_7317087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7309137 - 7317087

Intron Length:

7951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CATGTTTGAAAT

Flanking Amino Acid:

LEATKKAEYEGMISGYPPVL

Intron Amino Acid Position:

1431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

68.1

0.41

1.1

64.7

41.7

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

-0

1.6

62.4

41.8

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851