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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7323935_7324248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7323935 - 7324248

Intron Length:

314

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTCATTTATGT

Flanking Amino Acid:

SHGLVRPRVGRIEKMWVRDG

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

91.2

0.93

0.6

85.4

29.4

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

74.15

42.7

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851