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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7330376_7332801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7330376 - 7332801

Intron Length:

2426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TACGTTTGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

TGTATTGTACCT

Flanking Amino Acid:

EVLERARRMNRTDSEIYEDA

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

59.2

0.23

1.3

43.5

Major PPT

73.7

0.53

68.1

42.1

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

45.7

-0.2

2.2

68.35

42.9

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851