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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7334304_7336339_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7334304 - 7336339

Intron Length:

2036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTT

5'SS Class:

major

3'SS Sequence:

GACTAATTAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

ARHYNEEGSQVYNDAHMLEK

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.5

39.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

57.9

0.18

51.6

41.3

Minor 5ss

41.7

-0.9

3.6

64.7

46.6

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851