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Intron Name: Anas_platyrhynchos_platyrhynchos_13_7336617_7336853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7336617 - 7336853

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTTAACCTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

CTCTACTTAACC

Flanking Amino Acid:

TSDAGSSKRKSKKNMRKQRM

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

0.43

62.5

38.1

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

71.1

0.64

1.5

75.26

41.5

Associated Gene:

Gene:

PBRM1

Ensembl Gene ID:

ENSAPLG00000005420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005740

7304726 - 7360576

55851